Quantitative Characterization of Local Protein Solvation To Predict Solvent Effects on Protein Structure
نویسندگان
چکیده
منابع مشابه
Quantitative characterization of local protein solvation to predict solvent effects on protein structure.
Characterization of solvent preferences of proteins is essential to the understanding of solvent effects on protein structure and stability. Although it is generally believed that solvent preferences at distinct loci of a protein surface may differ, quantitative characterization of local protein solvation has remained elusive. In this study, we show that local solvation preferences can be quant...
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PREDICT-2ND: a tool for generalized protein local structure prediction
MOTIVATION Predictions of protein local structure, derived from sequence alignment information alone, provide visualization tools for biologists to evaluate the importance of amino acid residue positions of interest in the absence of X-ray crystal/NMR structures or homology models. They are also useful as inputs to sequence analysis and modeling tools, such as hidden Markov models (HMMs), which...
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ژورنال
عنوان ژورنال: Biophysical Journal
سال: 2012
ISSN: 0006-3495
DOI: 10.1016/j.bpj.2012.08.011